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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921001.1_cds_XP_016470042.1_62533
CDS Infomation

[gene=LOC107792346] [db_xref=GeneID:107792346] [protein=F-box/LRR-repeat protein 3-like] [partial=3'] [protein_id=XP_016470042.1] [location=join(39486..39813,39878..41049,41713..>41823)] [gbkey=CDS]
Sequence

ATGTTCAATCGTCTCCATCACCCATTTGACTTGGAATCATTTTCTTTGGTTTGCAAGAGA
TTTCTTGCTCTCACCAATCGTCTACGCCGCCATTTGTCTCTACTTGACTCCACTCTTCTC
ATAAACGGTACCATATCTAAACTCATTCACCGATTTTCGCATATTATCTCTATTGATCTT
AGTAATTTCCAAGGTGACCTTGATCTTGTTGTTCTTGACCTCGCCAATTCTGTCTCATCC
TATACGTCTAATATCGAACAACTTGATATCTCTAATCAGAAACAATTACCCGTCACCGGG
TTGAAGGAATTGGGCCGTAAATTGAAGGCACAGTCGTTTCCGTTTCTGGAAGAGTTTGAT
TGTAGTTATTCCAGTACGGATTTAAATCCCTATCCTGAACATATTAACCCTAGCGATTTG
GCGGTAACTGATTCCGGGATTGAGGTTTTATCAGTGAATTTGAGGAATTTGCGTAGGATT
AATGTTTCTAGGATTGAGCTAATTACTGATAAGTCCCTTGTTGCTCTGTCTAAGAATTGT
TTGAATTTACAAGGCATTGATGTGGTGGATTGCCCTCTGATAACTTCAAAAGGTGTCCAT
TCTATACTACGTAGTTGTACTGCTTTGAGTTGGATTTCAGTGTCCGAGATTCACTTTCCT
CGATCACGCTCTGGTTTTGAACGTTTGGCTTCTTGTCGCCGAGCTTTGCAGACATTGAAT
GTCACCAGCTCGATGATTTCGGATGAATTCCTCTTATTGATGGCCAAGTCTTCTCTCCCT
CTATCCAGGCTTTCAATTTGCTGGTGCATAAATTTCACATTATCTGGTATCTCTTTGCTC
TTGTGTGCATACCAATCACTAAAGTACTTATCTCTGGTTCAAGTAGATTTCTTGAGTGAT
GAGTCCATGAATGATTTATCCAAATATCTACAGATTCTAGTTACCATTGATGTCAGTGGT
TGTAAGAGATTGACCATTTCGACGTTCTTCACACTTGCAAGAAATTGTCCTTTACTAGAA
GCAATTAACATGGGAAGTACTGATTTGGGGACGAAGGATTCTTTTCATAATGGTGTGAAG
AACCCAAGAATCAGGTCTGTTAATCTCCGATATAATTGGTATCTAGATGATGGCACTCTC
ACAAAAGTTGCTTTAATGTGCCCCAATATGGAGATTCTTGATGTGTCCACATGTCTAAGT
CTTACAGAGGCAGGTATTGCTTCAGTTCTTGAGGTTTGCAATCAGATAAGGAACTTGCAG
TTTGAGAGCTGTCCATTGATTAAACATATAGGAGAAGGCGCGGAATTGCCTAATGTTGAG
GTAGTCAGTGCAGCTACTTCAGCAATAAACGACGAAGGCCTGGCCTTGATTGGGAGCAGA
TGTTCTCGCCTATTGAAATTAAACTTGACTTTCTGTGAAGGAGTGACAGCAGATGGCATT
CAGGCTATGGTGACAAATTGTAGATCATTGAGAGGGATACAATTGAAGATGTGTCCGCAA
AAGATTACCATAGCCGAGACTGGAGAATTTCCATATGTTCTCCACGGTGATGAGCTCCTT
TCTATCTTTGTTGCAAGACAATTAAAGATGGCAAAATTCTGTTACTGTGAG

Peptide Sequence

PEP ID

XP_016470042.1
PEP Infomation

PREDICTED: F-box/LRR-repeat protein 3-like, partial [Nicotiana tabacum]
Sequence

MFNRLHHPFDLESFSLVCKRFLALTNRLRRHLSLLDSTLLINGTISKLIHRFSHIISIDL
SNFQGDLDLVVLDLANSVSSYTSNIEQLDISNQKQLPVTGLKELGRKLKAQSFPFLEEFD
CSYSSTDLNPYPEHINPSDLAVTDSGIEVLSVNLRNLRRINVSRIELITDKSLVALSKNC
LNLQGIDVVDCPLITSKGVHSILRSCTALSWISVSEIHFPRSRSGFERLASCRRALQTLN
VTSSMISDEFLLLMAKSSLPLSRLSICWCINFTLSGISLLLCAYQSLKYLSLVQVDFLSD
ESMNDLSKYLQILVTIDVSGCKRLTISTFFTLARNCPLLEAINMGSTDLGTKDSFHNGVK
NPRIRSVNLRYNWYLDDGTLTKVALMCPNMEILDVSTCLSLTEAGIASVLEVCNQIRNLQ
FESCPLIKHIGEGAELPNVEVVSAATSAINDEGLALIGSRCSRLLKLNLTFCEGVTADGI
QAMVTNCRSLRGIQLKMCPQKITIAETGEFPYVLHGDELLSIFVARQLKMAKFCYCE

Transcript Sequence

Gene sequence data has not been registered.